Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX360541: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-213826' containing sample 'Unclassified bacteria hmp_mda_pilot_jcvi_0006'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.8M spots, 560.4M bases, 359.2Mb downloads

UUID: de5e4524-c796-4237-b713-6380e5699fb5

Design: Illumina sequencing of Clostridiales bacterium hmp_mda_pilot_jcvi_0006 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA218143 • SRP030493 • All experiments • All runs

Sample: Generic sample from Clostridiales bacterium hmp_mda_pilot_jcvi_0006

SAMN00828710 • SRS300611 • All experiments • All runs

Organism: Clostridiales bacterium hmp_mda_pilot_jcvi_0006

Library:

Name: Pond-213826

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 281561.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:3SQOR

material_type: DNA:DNA Genomic

product_order: PDO-61

product_part_number: P-WG-0004

project: G28978

research_project: RP-129

root_sample_id: SM-1VE5R

sample_id: SM-3SQOR

work_request: 34390

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-01-14 11:53:48.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.8M spots, 560.4M bases, 359.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1003233	2,774,153	560.4M	359.2Mb	2013-09-27

ID:: 509746

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